Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKISTKGRYGLTLMISLAKKEGQGCISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSVRGAKGGYQLRVPAEEISAGDIIRLLEGPITFVESI-----E--SEPPAQKQLWIRMRDAVRDVLDNTTLKYLAEYVDTSEDLDGYMFYI
1XD7 Chain:A ((6-132))
----SRLAVAIHILSLISMD---EKTSSEIIADSVNTNPVVVRRMISLLKKADILTSRAGVPG-ASLKKDPADISLLEVYRAVQK--------NPKCPVGKKIQNALDETFESVQRAMENELASKSLKDVMN---------------
General information:
TITO was launched using:
RESULT:
Template:
1XD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61674 for 727 contacts (-84.8/contact) +
2D Compatibility (PS) -11585 + (NN) -2221 + (LL) 1964
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -79216.0 ( -108.96 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1XD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XD7-query.scw
PDB file :
Tito_Scwrl_1XD7.pdb
: