Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRIKPVSEMMERETDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDS-----TNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIK---PNVPVIYAVKNEDALKYVRERAIEQHAKPIELDREIVVV--SQ--NDEFTYRYKDYELETIILSMLGEHQKQNAALAITALIELNEQGLIELDFNKMIDGIE-SVRWTGRIEQVHDKPLIILDGAHNSESIDALIDTIKQYHDKEKVDILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIENDEIQLVDDYVEFIKNYQGDTLVITGSLYFISEVKSKLDFEAL |
| 3EAG Chain:A ((107-326)) | -------------------------------------HHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENF-------GVSA----------------------------RLPQT-----PRQDPNS-QSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFA-DLGAIQTQFHYLVRTVPSEGLIVCNGRQQSLQDTLDKG---CWTPVEKFGTEHGWQAGEANADGSFDVLLDGKTAGRVKWDLMGRHNRMNALAVIAAARHV------GVDIQTACEALGAFKNVKR-------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138170 for 1715 contacts (-80.6/contact) +
2D Compatibility (PS) -22848 + (NN) -7973 + (LL) 16756
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -157485.0 ( -91.83 by residue)
QMean score : 0.350
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