Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDFEKPLFEIRNKIESLKESQDKNDVDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPT-TLDYIPYIFD--SFMELHGDRNFRDDPAMIGGIGFLNGRAVTVIGQQRGKDT--KD---NIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIG----IANKVLMLE--NSTYSVISPEGAAALLWKDSNLAKIA------A----E--TMKITAHDIKQLGIIDDVISEPLGGAHKDVEQQALAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYIE |
| 3GF3 Chain:A ((318-570)) | ------------------------------------------------------------MNQKRPYDIYEVIARLFDNSEFSEYKKG--YG--PEMVTGLAKVNGLLVGVIANVQGLLMNYPEYKQNSVGIGGKLYRQGLIKMNEFVTLCARDRIPLIWLQDTTGIDVGDEAEKAELLGLGQSLIYSIENSKLPSLEITIRKASAAAHYVLGGPQGNNTNVFSIGTGACEYYVMPGETAANAMYSRKLVKA--QPIIGKMNDMIQMYTDKSRPKYCTEKGMVDEIV---------DMTE----VRPYIQAFTEAAYQN-PQSICP-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65995 for 1679 contacts (-39.3/contact) +
2D Compatibility (PS) -24121 + (NN) -7187 + (LL) 6612
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -102591.0 ( -61.10 by residue)
QMean score : 0.412
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