Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHK-KGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLN-DAAKKQINNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKR-MLVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGVGALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRW-NPKNPGEHQYATDIKWAESNATIIADFYKNMKTEGKY-FKYFVYKDDSKHLNK |
| 2F96 Chain:A ((19-219)) | --RHPMARRFRGYLPVVVDVETGGF-------------NSATDALLEIAATTVGMDEKGFLFPEHTYFFRIEPFEGANIEPAALEFT-------------------------GIKLDHPLRMAVQEEAALTEIFRGIRKALKANGCKRAILVGHN----------------------------SSFDLGFLNAAVARTGIKRNPFHPFSSFDTATLAGLAY-GQTVLAKACQAAGMEFDNREAHS-------ARYDTEKTAELFCGIVNRWKEMGGW------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24115 for 1562 contacts (15.4/contact) +
2D Compatibility (PS) -20520 + (NN) -1488 + (LL) 5988
1D Compatibility (HY) -400 + (ID) 1500
Total energy: 6195.0 ( 3.97 by residue)
QMean score : 0.146
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