Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSN-ANN-ADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSGNEILELTYQL-VILIQLFMAFI-------IGVLAAH-QFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIINTSLVVIIA-CL---IYMVLQNKLGSFELIILPVLVPIVS-GGI----GLITLPYIRKITQAI------------------GNVIHSF-TDLNPLLMSILISVAFSLLMVTP-IS-------LVAIATAISLNGLGSGAA---NLGIVAACVTFLFGSLRVNSIGVNAVLLIGAAKMMI--PVYL-KNLIISIPLTINGIIT---GIIAYVLQVKGTPLSAGFGYTGLVGPINAFNRMSGDPTMNIILLALGYFVIPFVSAFIVHELCKKFIPIYSNDIYKFEVPKQ |
| 4KQ7 Chain:A ((2-374)) | QSNMTNEMFDLAKLKSGVKNKRISSTD----PTGGNRDHLEPFKPGEKRIIADIKGMGVINHIWVTIAPPPPTLSRNDIIIRMYWDGNDYPSVESPIGPFFGQGWDERYNYASLPLSAGPENGTGLSCYFAMPFEKGARIEIENQSDR-NIDAFYFYVDYLEMAKLPKDMGRFHAWYNHNLTEALPEGETEWGVTGAQKPNTTGERNYVFMETQGK---GHFVGINYYVHCPTPMWYGEGDDMWFIDGEKVPSLIGTGTEDFFNTAWCPKEAFSHPYFGYPRVNN-DIGWLGRTHVYRFFIEDPIFFEKSLKGTIEHGSNNNLTLDLSTVAYWYQDSAVALP------------EAPTKAQRAPK-------------PFINHVDIHRWRDAWRKSKGNKATLWGNE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263523 for 2252 contacts (-117.0/contact) +
2D Compatibility (PS) -33419 + (NN) 8823 + (LL) 3616
1D Compatibility (HY) -400 + (ID) 2800
Total energy: -287703.0 ( -127.75 by residue)
QMean score : 0.116
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