Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIESIEHELEESIASLRQAGIRITPQRQAILRYLISSHTHPTADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSSRFDFNT-HNHYHIICEQCGKIVDFQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK
2XIG Chain:A ((4-148))
----LETLESILERLRMSIKKNG--NSKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFISVLETSKSGRRYEIAAKEHHDHIICLHCGKIIEFADPEIENRQNEVVKKYQAKLISHDMKMFVWCKECQES
General information:
TITO was launched using:
RESULT:
Template:
2XIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47348 for 928 contacts (-51.0/contact) +
2D Compatibility (PS) -15723 + (NN) -5675 + (LL) 780
1D Compatibility (HY) -9600 + (ID) 1950
Total energy: -79516.0 ( -85.69 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2XIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XIG-query.scw
PDB file :
Tito_Scwrl_2XIG.pdb
: