Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVTREEVEHIANLARLQISPEET--EEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
1S12 Chain:A ((1-94))
MIKVTVTN----SFFEVTGHAPDKTLCASVSLLTQHVANFLKAEKKAKIKKESGYLKVKFEELENCEVKVLAAMVRSLKELEQKFPS--QIRVEVIDNGS--
General information:
TITO was launched using:
RESULT:
Template:
1S12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5490 for 609 contacts (9.0/contact) +
2D Compatibility (PS) -10098 + (NN) -4416 + (LL) 364
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -10760.0 ( -17.67 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1S12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S12-query.scw
PDB file :
Tito_Scwrl_1S12.pdb
: