Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDIQKIKKELSELVERVDDVEILANETADHVLELREEHKQHHNELRESHKELKDKQDKVVDENLEQTKILNRIEERYQTQVDVAQKNEEKTLAQNKWLVGAIWALVTIVMIAVITASITALLP
3U1C Chain:A ((-2-51))
--HMDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLR----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3U1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11137 for 203 contacts (54.9/contact) +
2D Compatibility (PS) -5841 + (NN) -5852 + (LL) 7224
1D Compatibility (HY) 3200 + (ID) 250
Total energy: 9618.0 ( 47.38 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_3U1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U1C-query.scw
PDB file :
Tito_Scwrl_3U1C.pdb
: