Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQKIGVETGG------ELKTAYADGGPIESGNTDGEGKISLQMHAFPKEIRK-----------------------IVFNEDYDEDGVYEEKQGKQ--NNYVAVWFRQERRDGTFRTVLLPK---VMFTNPKIDGET-AEKDWDFSSEEVE--------GEALFPLVDNKKSVRKYIFDSANMTNHDGDGEKGEEAFLKKILGEEYTGNVTEGNEETL |
| 4NDO Chain:A ((32-276)) | KRPIRLLPWLQVVKIGGRVMDRGADAILPLV-EELRKLLPEHRLLILTGAGVRARHVFSVGLDLGLPVGSLAPLAASEAGQNGHILAAMLASEGVSYVEHPTVADQLAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFLPETSATDLAKSEGPLPVDRALLDVMATARHIERVQVVNGL-----------VPGRLTAALRGEHVGTLIRTGVRPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31633 for 1570 contacts (20.1/contact) +
2D Compatibility (PS) -21544 + (NN) -8179 + (LL) -184
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -1824.0 ( -1.16 by residue)
QMean score : 0.258
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