Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDEAKFVLLQLYSIYLGRIDEGMSKHSASYFGSDESSFNAFFLGFNFEDYIDAVLELKHRDFVIASAEDGGFLEMALSREGIAYSESESKKDYKTLMGLIRDLKKLII
2OBP Chain:A ((47-92))
--------------------------------------------QLPMSVLRRVLTQLQAAGLADVSVEADGRGHASLTQEGAALAAQLF-------------------
General information:
TITO was launched using:
RESULT:
Template:
2OBP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12181 for 237 contacts (-51.4/contact) +
2D Compatibility (PS) -5172 + (NN) -3177 + (LL) 4764
1D Compatibility (HY) 0 + (ID) 400
Total energy: -16166.0 ( -68.21 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_2OBP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OBP-query.scw
PDB file :
Tito_Scwrl_2OBP.pdb
: