Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLD-KKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
1M1F Chain:A ((1-110))
-MERGEIWLVSLDPTAGHEQQGTRPVLIVTPAAFNRVTRLPVVVPVTS--FARTAGFAVSLDGVG--IRTTGVVRCDQPRTIDMKARGGKRLERVPETIMNEVLGRLSTILT---------
General information:
TITO was launched using:
RESULT:
Template:
1M1F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42839 for 747 contacts (-57.3/contact) +
2D Compatibility (PS) -11312 + (NN) -1285 + (LL) 1392
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -61944.0 ( -82.92 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_1M1F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M1F-query.scw
PDB file :
Tito_Scwrl_1M1F.pdb
: