Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS
1N1Q Chain:C ((4-148))
-SIQQLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEEASIKEATGGESAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADMLDAIEAGLEKHVWMLEAFL-
General information:
TITO was launched using:
RESULT:
Template:
1N1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35216 for 1121 contacts (-31.4/contact) +
2D Compatibility (PS) -15810 + (NN) -9727 + (LL) 180
1D Compatibility (HY) -12400 + (ID) 3600
Total energy: -76573.0 ( -68.31 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1N1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N1Q-query.scw
PDB file :
Tito_Scwrl_1N1Q.pdb
: