Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MLE-----SKWGLRFIAFLLALFF----FLSVNNVFGNIFN---TGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSN--AKAGKYQEKYQVKGLADDIH-YSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAE------------------------------------VTAFDKK-LNKLNVSIQPNEVNLQ--VKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQN-ISEVDAEVDLDGISESTEKTVKINLPEHVTKAQPSETKAYINVK----------- |
| 4D10 Chain:B ((34-447)) | VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 52534 for 1992 contacts (26.4/contact) +
2D Compatibility (PS) -31925 + (NN) -1198 + (LL) 0
1D Compatibility (HY) -7600 + (ID) 1900
Total energy: 9911.0 ( 4.98 by residue)
QMean score : 0.166
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