Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEG--QEVDFVDATLAVAKDVQSQEGNLGIVIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGDTLAKNVVKGFVEGKYDGGRHQIRVDMLNKMC
3HE8 Chain:A ((1-144))
MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQGGRHATRVGKIGEIE
General information:
TITO was launched using:
RESULT:
Template:
3HE8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73902 for 1209 contacts (-61.1/contact) +
2D Compatibility (PS) -15396 + (NN) -9116 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2500
Total energy: -110914.0 ( -91.74 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_3HE8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HE8-query.scw
PDB file :
Tito_Scwrl_3HE8.pdb
: