Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLLLPLIIMLLVLAACGNQGEKNNKAETKSYKMDDGKTVDIPKDPKRIAVVAPTYAGGLKKLGANIVAVNQQVDQSKV---L-K--DKFKGVTKIGDGDVEKVAKEKPDLIIVYST--DKDIKKYQKVAPTVVVDY-N-K-HKYLEQQEMLGKIVGKEDKVKAWKKDWEETTAKDGKEIKKAIGQDATVSLFDEFDKKLYTYGDNWGRGGEVLYQAFGLKMQPEQQ-K-LT---AKAGWAEVKQEEIEKYAGDYIVSTSEGK-----PTPGYESTNMWKNLKATKEGHIVKVDAGTYWY-NDPYTLDFMRKDLKEKLIKAAK |
| 3LHS Chain:A ((5-295)) | ---------------------------ASTISVKDENG-TVKVPKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEIKFD--RNQKVLPAVVAKAGLLAHPNYS--YVGQFLNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRDVWARSRGLISSEEMAKELVELSKKEQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51673 for 2200 contacts (-23.5/contact) +
2D Compatibility (PS) -29077 + (NN) -11369 + (LL) 2436
1D Compatibility (HY) -7200 + (ID) 2900
Total energy: -99783.0 ( -45.36 by residue)
QMean score : 0.441
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