Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAGLWIALNEEKDIPRNEIHFSYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQSIYFTDPDGHKLELHTGTLENRLNYYKEAKPHMTFYK
4JH4 Chain:B ((1-138))
MLNGINHLCFSVSNLEDSIEFYEKVLEGELLVRGRKLAYFNICGVWVALNEEIHIPRNEIYQSYTHIAFSVEQKDFESLLQRLEENDVHILKGRERDVRDCESIYFVDPDGHKFEFHSGTLQDRLNYYREDKPHMTFY-
General information:
TITO was launched using:
RESULT:
Template:
4JH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58401 for 870 contacts (-67.1/contact) +
2D Compatibility (PS) -14681 + (NN) -2696 + (LL) 64
1D Compatibility (HY) -17600 + (ID) 4350
Total energy: -97664.0 ( -112.26 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_4JH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JH4-query.scw
PDB file :
Tito_Scwrl_4JH4.pdb
: