Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIRHIRNATAVIEYGGKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIEVL-PKDIKIYAQNEEDASEVERYGFTNVSVFN--D-VTHIGEIELIKTDAQHGHGEI--LKMTGHVHGMILKHSEEPTLYLAADTVWFEGVEKALKTYQPDVVVLNGGANQFFEGGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGNRVVVPNDGELLTFEK
3KL7 Chain:A ((30-230))
LTITFIKHGSLMLTYDNHSIQVDPVSEYADY--------------------T---TF-PKADIILITHEHGDHLDPKAIQAVEKSDTEIIANEN-SQKKLGKG-----KVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTF-DGLRVYIAGDTEDIPEMKD-L--KDIDIAFLPVNQ-------PYTMTVSQAAKAARMFSPKILYPYHYGDT-----KIGELKDALKDSGIDVR--------------
General information:
TITO was launched using:
RESULT:
Template:
3KL7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137588 for 1644 contacts (-83.7/contact) +
2D Compatibility (PS) -21140 + (NN) -5876 + (LL) 2712
1D Compatibility (HY) -8800 + (ID) 2150
Total energy: -172842.0 ( -105.14 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_3KL7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KL7-query.scw
PDB file :
Tito_Scwrl_3KL7.pdb
: