Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLS----EHVYKRLNELGIKQIAQRSAGFDTYDLELANKYNLIVSNVPSYSPNSIAEFAVNQAINVVRHFNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFPNAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSLVDTKALLDALDNGVIKGAALDTYEFERK-LFPSDQRGKTPNDPLLESLIDREDVILTPHIAFYTEAAVKNLIVDALDATLDVLQTGDTRLRVN |
4PRL Chain:B ((2-316)) | --KIAVFSPSESERKLVAATEKKFGCELKLIDESLSAENVDQVADCDGVLLK---PLGNLDDEIVYKKLADYGIKSIGLRIVGTNTIDFDLAKKYHLTVTNVPVYSPRAIAEMAVTQAMYLNRKIGEFKANMDKGDFTNPDSLISNEIYNKTIGLIGVGHIGSAVAQIFS-AMGAKVLAYDVIYNPEVEPYLTYAD-FDTVLKEADIISLHTPLLKSTENMIGKKQFAEMKNDAILINAARGELVDTAALIEALEKHEIAAAGLDTLAHESSYFFKKVDDAQIPAD--YKKLAAMPNVIVTPHSAYFTKTSVRNMIEISLRDTI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188767 for 2477 contacts (-76.2/contact) +
2D Compatibility (PS) -33650 + (NN) -14395 + (LL) 1468
1D Compatibility (HY) -28800 + (ID) 5750
Total energy: -269894.0 ( -108.96 by residue)
QMean score : 0.541
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