Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW |
| 1VMG Chain:A ((25-91)) | -------------------------------------------------------------------------------------------------------------------------KEMYFEKD-SQRGIYATFTWLVEEVGELAEALLSNNLDSIQEELADVIAWTVSIANLEGIDIEEALKK--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5904 for 390 contacts (-15.1/contact) +
2D Compatibility (PS) -7309 + (NN) -4782 + (LL) 8860
1D Compatibility (HY) 400 + (ID) 650
Total energy: -9385.0 ( -24.06 by residue)
QMean score : 0.428
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