Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYSAIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATS-IIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKE---HGLEGVSGLHFHTHCEQN-ADALCRTLEHVERHFKP----YLENMAWVNFGGGHHITRS--DYDVNLLIQTIKDFKE-----RYHNTEVILEPGEAIGWQCGFLIASVIDIVQ-NDQEIAILDASFSAHMPDCLEMPYRP--SILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGS-FSFETPLKRGDKIVFQDMLHYTIVKNN-SFNGVPLPSLAKIDSQGFKILKS-FSYEDYKNRN |
| 2J66 Chain:A ((12-414)) | ---TKRFETPFYLYDGDFIEAHYRQLRSRTN-PAIQFYLSLKANNNIHLAKLFRQWGLGVEVASAGELALARHA--GF-SAENIIFSGPGKKRSELEIAVQSGIYCIIAESVEELFYIEELAEK--------ENKTARVAIRINPDKSF--TA-IKMGGVPRQFGMDESMLDAVMDAVRSLQFTKFIGIHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYFEKALDIGKITRTVSDYVQEARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVFVIVDGGMHHHAAS------PMEYIP---------------------LEKVTIAGPLCTPEDCLGKDVHVP-ALYPGDLVCVLNSGAYGLSFSPVHFLGHPTPIEILKRNGSYELIRRKGTADDIVATQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138071 for 2963 contacts (-46.6/contact) +
2D Compatibility (PS) -38593 + (NN) -12905 + (LL) 3484
1D Compatibility (HY) -13600 + (ID) 3350
Total energy: -203035.0 ( -68.52 by residue)
QMean score : 0.410
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