Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMHQIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEIAIYKAVCVRDKARARFPLRLMVQEVK
1MBU Chain:D ((25-93))
--------PSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
General information:
TITO was launched using:
RESULT:
Template:
1MBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34215 for 434 contacts (-78.8/contact) +
2D Compatibility (PS) -7855 + (NN) -8273 + (LL) 760
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -58983.0 ( -135.91 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_1MBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MBU-query.scw
PDB file :
Tito_Scwrl_1MBU.pdb
: