Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSEYVYTLRDLDKDALIRPMASIGANQATEARLLVGQKGYDRYAQISQKTQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLNQQEPYYGDIGVRLEERH-----KRLVVAQFDPFFPK---NPFLKNDEILAINDYKIH--SLAEFE--WVVSNLSYQSLAKVKIKRNHQIKE--VTLKVNKRYGGFLLKDTFLERYGIAL---DERFIITKIGAHLPKGLDF-LKLGDRILWVNHKSVSFNP-KALREALS--TPKIELLVWRQGFEFYIKVR |
3R0H Chain:A ((28-200)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFH-TTYEKAVTLTVFRADPPELEKFNVDLMK---------KAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKPTLRTEAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R0H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71125 for 1021 contacts (-69.7/contact) +
2D Compatibility (PS) -15941 + (NN) -1199 + (LL) 12184
1D Compatibility (HY) -6800 + (ID) 1350
Total energy: -84231.0 ( -82.50 by residue)
QMean score : 0.391
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