Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRMLAEFEKIQAILMAFPHEF----G-----D--WA--YCIEEARESFLHIIQTIA-KHAKVLVCVHTNDTIGY----ETL-----K----------------------------N-----LPGVEI------------ARIDTNDTWARDFGAISVENHGVLECLDFGFNGWGLKYPSNLDNQVNFKLKHLG--FLKHP-LK--TMPYILEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKEL------GAKQVLWYSYGYLKGDDTDSHTDTLARFLNKDTIVYSACEDENDEH--YTAL------------KKMQEELKTFKKLDGTPYKLIPLEIPKAVYNENQQRLPATYVNFLLCN-NALIVPTYNDPNDTLILETLRQHTPLEVIGVDCNTLIKQHGSLHCVTMQLY |
| 1S9R Chain:A ((11-404)) | -IHVYSEIGELESVLVHEPGREIDYITPARLDELLFSAILESHDARKEHKQFVAELKANDINVVELIDLVAETYDLASQEAKDKLIEEFLEDSEPVLSEEHKVVVRNFLKAKKTSRELVEIMMAGITKYDLGIEADHELIVDPMPNLYFTRDPFASVGNG---VTIHYMRYKV------RQRETLFSRFVFSNHPKLINTPWYYDPSLKLSIEGGDVFIYNNDTLVVGVS---------ERTDLQTVTLLAKNIVANKECEFKRIVAINV---PKWTNLMHLDTWLTMLDKDKFLYSPIANDVFKFWDYDLVNGGAEPQPVENGLPLEGLLQSI---INKKPVLIPIAGEGASQMEIERETHFDGTNYLAIRPGVVIGYSRNEK----TNAALEA-AGIKVLPFHGNQLSLGMGNARCMSMPLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121018 for 2603 contacts (-46.5/contact) +
2D Compatibility (PS) -31653 + (NN) -8994 + (LL) 1340
1D Compatibility (HY) -12800 + (ID) 2350
Total energy: -175475.0 ( -67.41 by residue)
QMean score : 0.371
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