Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDSKIWSNVEYHFK---RKDNLALITELLNLDLFPIKDSYMAYLKRDKS---A-----LERNPRTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKDWINNKSLGVEPVDLNDFIANENDAILKASDNVMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGHQNAQFNDAINTIETPNIKAIKVAILDGVLYIESNNKMRKLLDTTYRNYHIMSALVLREFLYQI |
2DBF Chain:A ((4-92)) | --------------------------GSSGDMKQLAEDVKLQLYKLLEIPDPDKNWATLAQKLGLG------ILNNAFRLSPAPSKTLMDNYEVSG-GTVRELVEALRQMGYTEAIEVIQAASSSGPSSG--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30967 for 491 contacts (-63.1/contact) +
2D Compatibility (PS) -8451 + (NN) -4837 + (LL) 11460
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -36845.0 ( -75.04 by residue)
QMean score : 0.564
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