Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------MMTKNAYAFVVIEKSIMVFKCAKDKGLIPITEGFVPLKEGFLRSFKERCNLDFLENLDLLFLYDYQFPSEVFSLCKDLKNSIWDR-KLVVVLVEALEGFKGL---NLSLKIEDRHSNSLGNGVQKLLTNADLGSNHKP--IVIDSMKTYHQS-QQEKYKRERGETLEVRPTTPP--SYGGGSIRISGD-KKPDSNEENF--- |
| 3QY9 Chain:A ((3-243)) | SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKTPYQQYQHIADVKGADVAIDFSNPNLLFPLLDEDFHLPLVVATTGEKEKLLNKLDELSQ-------NMPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAHHNKKVDAPSGTLEKLYDVIVSLKEN-VTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31836 for 1188 contacts (-26.8/contact) +
2D Compatibility (PS) -18832 + (NN) -1083 + (LL) 436
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -56465.0 ( -47.53 by residue)
QMean score : 0.354
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