Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIERLVGNLRDLNPLDFNVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSEPNFKVSLASDFKVVVK
3LA0 Chain:B ((1-149))
MIIERLVGNLRDLNPLDFSVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVS---------------------
General information:
TITO was launched using:
RESULT:
Template:
3LA0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58717 for 1060 contacts (-55.4/contact) +
2D Compatibility (PS) -15581 + (NN) -2892 + (LL) 1380
1D Compatibility (HY) -21600 + (ID) 7400
Total energy: -104810.0 ( -98.88 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_3LA0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LA0-query.scw
PDB file :
Tito_Scwrl_3LA0.pdb
: