Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENVPLSYDYSISKLFLYAMIAFGIIGMLIGIVLAFELSFPSLNYI----AGEYGVFGRLRPLHTNAVIYGFTLGGIWASWYYIGQRVLKITYHQHPFLKIVGLLHFWLWILLLVLGVISLFAGLTQ--SKEYAELM----WPLDIIVVVAWVLWGVNMFGSMSVR---RENT--IYVSLWYYIATYV----GIAVMYIFNN-LSIPTYFVADMGSVWHSISMYSGSNDALI---QWWWGHNAVAFVFTSGVIGTIYYFLPKESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYST-VPDWVQTLSSVFSVVLILPSWGTAINMLLTM------RGQW---HQ----LKESPLIKFLVLASTFYMLSTLEGSIQAIKSVNALAHFTDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYS--GRLVDFQFWIMTLGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKALIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREPNYATPMAR |
| 3S8F Chain:A ((22-505)) | -------YPEKKATLYFLVLGFLALIVGSLFGPFQALNYGNVDAYPLLKRLLPFVQSYYQGLTLHGVLNAIVFTQLFAQAIMVYLPARELNM----RPN-MGLMWLSWWMAFIGLVVAALPLLANEATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWRRWKAANPGKVTPLVTYMAVVFWLMWFLASLGLVLEAVLFLLPW-----------SFGLVEGVDPLVARTLFWWTGHPIVYFWL-LPAYAIIYTILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTWKMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHWAGL-LNVPRRAYIAQVP------DAYPHAAVPMVFNVLAGIVLLVALLLFIYGLFSVLLSRERKPELAEAPLPFAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -478072 for 3816 contacts (-125.3/contact) +
2D Compatibility (PS) -43899 + (NN) 3365 + (LL) 2828
1D Compatibility (HY) -29600 + (ID) 4400
Total energy: -549778.0 ( -144.07 by residue)
QMean score : 0.286
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