Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKSWTKKWFLILFLMASCFGHLVATTGEKYFKMANQALKRGDYHRAVAFYKRSCN--LRMGVGCTSLGSMYEYGDGVDQ-NISKAVFYYRRGCNLR--NHLACASLGSMYEDGDGVQKDFPKAIYYYRRGCHLK--GGVSCGSLGFMYFNGTGVKQNYAKALSFSKYACSLN--YGISCNFVGYMYKSAKGVEKDLKKALANFKRGCHLK-----------DGASCVSLGYLYEAGMDVKQNEEQALNLYKKGCSL--KEGSGCHNVAVMYYTGKGAPKDLEKATSYYKKGCALG--FSGSCKVLEVIGKESDNLQDDAQNDTQDSVQ |
| 3HYM Chain:B ((58-317)) | -----------------------------CLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLM----VGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAV----ESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGL----TNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ----NGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK----LKKYAEALDYHRQALVLIPQNASTYSAIGYIHSL----MGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGD------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78993 for 1895 contacts (-41.7/contact) +
2D Compatibility (PS) -23821 + (NN) -4879 + (LL) 2748
1D Compatibility (HY) -9600 + (ID) 1750
Total energy: -116295.0 ( -61.37 by residue)
QMean score : 0.273
|
|
|