Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV-----------LKGVYFDECLKKGKNHIITTVAEHPAVRSTCNFL-ESLGVEVTYLPINE-HGSITADQVKEAITEKTALVSVMWANNETGLIFPIEEIGAICKE----------KGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVG-LTP----LFHGGEHMNGRRSGTLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRVH---------RVPNTTLISVRGIEGEAMLWDLNRSNIAASTGSACASE-DLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAVRLRNISSSY |
| 3A9Z Chain:B ((18-428)) | --RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKP-QDIIFTSGGTESNNLVIHSTVRCFHEQ------------TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVR-GVGKLTPLYPMLFGGGQERN-FRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERL-----EAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGPV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166223 for 3153 contacts (-52.7/contact) +
2D Compatibility (PS) -38468 + (NN) -11441 + (LL) 1540
1D Compatibility (HY) -22400 + (ID) 7200
Total energy: -244192.0 ( -77.45 by residue)
QMean score : 0.518
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