Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILPALLMGFVGLNASDRLLEIMRLYQKQGLEVVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPNFTRY--DGM---SFNAFKEYKKRVFAKNEK-KNIAFSSINVIPYPNSQNKRLFYVVFDQDYKAYQQNKLSYSSNSQKELYVEIE-NNQASIIMEK |
| 2GXF Chain:A ((3-119)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGD-----TVLVLSQTLLD----------MERRATYVFKKNAQGEWLCVIDN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -45598 for 603 contacts (-75.6/contact) +
2D Compatibility (PS) -11083 + (NN) -3661 + (LL) 14328
1D Compatibility (HY) -5600 + (ID) 450
Total energy: -52064.0 ( -86.34 by residue)
QMean score : 0.458
|
|
|