Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKTLVKNTIYSFLLLSVLMAEDITSGLKQLDNTYQETNQQVLKNLDEIFSTTSPSANNKIGQEDALNIKKAAIALRGDLA-LLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQKTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSLKAYQSNIGGTASLITASQTLVESLKNKNFIKGIKKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK------------------------------------------------------------------------------ |
| 1GOS Chain:A ((4-500)) | KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEG--------NYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGS-LEALEPVHYEEKNWCEEQYSGGCYTTYFPPG-------------------ILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSEPESVDVPAQPITTTFLERHLPSVPGLLRLIGLTT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -18648 for 1378 contacts (-13.5/contact) +
2D Compatibility (PS) -21595 + (NN) 2818 + (LL) 2636
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -41389.0 ( -30.04 by residue)
QMean score : 0.117
|
|
|