Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELGNKNIKPGRKRVAVDELKRNFSVTFYLSKEEHDVLRRLADEEVESVNSFVKRHILKTIIYKKGTNQDSSINCDSSSRL
1BAZ Chain:A ((5-53))
--------------------SKMPQVNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIGA------------
General information:
TITO was launched using:
RESULT:
Template:
1BAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5475 for 223 contacts (-24.6/contact) +
2D Compatibility (PS) -5373 + (NN) -2744 + (LL) 1336
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -14756.0 ( -66.17 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1BAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BAZ-query.scw
PDB file :
Tito_Scwrl_1BAZ.pdb
: