Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMNAIRWPKKWIPGETDNFVSNEVIVKGLDFNKVVQHLRDASHWEKYYKNSGN-IHMYHQDNTILKDKTRFCFETF---G--FLVEAEVEEFELKDAILRLAWRGWNEAKGDEYLEVYHAWLVEKLDNDRVRILTQESQSGVP----AKA----LAKSVPNAMLNGHQAWLDGLVAYSR
2IL5 Chain:A ((12-166))
-----------------EHVEVEIEK-LYKFSPELVYEAWTKKDLLKQWFMTSARTNKEI---EADVKEGGKYRIVDQQRNGKVNVIEGIYESLVM---DEYVKMTIGMP----SETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIE
General information:
TITO was launched using:
RESULT:
Template:
2IL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41082 for 973 contacts (-42.2/contact) +
2D Compatibility (PS) -15058 + (NN) -1224 + (LL) 1568
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -61696.0 ( -63.41 by residue)
QMean score : 0.248
(partial model without unconserved sides chains):
PDB file :
Tito_2IL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IL5-query.scw
PDB file :
Tito_Scwrl_2IL5.pdb
: