Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILEVAFSISNDVHL-VLHHQQERIKEAVSKRFKGVIFHAQIVEKYSGTGGAIMQENKTPI-PTQHERVLILNADMPLITKDALTPLLE---SHNNAIGLL--HLADPKGYGRVIL-ENHQVKKIVEEKDANDEEKTIKSVNAGVYFFERKFLERYLPKLHDQNAQKEYYLTDLIALGIKGNEKIDAIFLEE-ECFLGVNSQTERAKAEEIMLERLRKNAMDLGVVMQLPSSIYL------------EKGVSFKG------ECVLEQGVRLIGNCLIENARIKAYSVIEESQIINS-SVGPFAHARPKSVI-CDSHVGNFVETKNAKL-QGTKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKKKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRTPQTNIENGYFKFFKKP |
| 1HM8 Chain:B ((15-453)) | ----IILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAGQTEFVTQSEQL-----GTGHAVMMTE--PILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDNAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVI-TNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKDEYATRLPHHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278652 for 3319 contacts (-84.0/contact) +
2D Compatibility (PS) -45067 + (NN) -12426 + (LL) 1152
1D Compatibility (HY) -28400 + (ID) 8750
Total energy: -372143.0 ( -112.13 by residue)
QMean score : 0.521
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