Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MVDAFFQIIVLLFSLFLGARLGGLGVGYAGGLGVLILCLFLGLNPGKIPFDVILIIMA--VISAISAMQKAGGLDYLVQIAEKILRKHPKQINYLAPSVAYFLT-ILAGTGHTVFSLIP----VIVEVSQSQNIKPKAPLSLAVVSSQVAITASP-----VSAAVVFMSGILEPLGADYLTLLM--VWIPTTFLACMLTAFVMGF-------TDLKLDSDPNYLERLKAGKISPPM----MKKEKETSKSAKLSL-WIFIGGVVAIVFYASAISKNIALISPVILGRDYAI--VSFMLSVATLIAIFCKINANEIAHSSVFKS----------GMQACVCV------LGVAWLGDTFVSNHIDEIKRYASFLIADYPFLLAVALFLASMLLYSQAATSKALIPSVITALGISANHTEHLYIIVASFASVSALFVLPTYPTLLGAIAMDHTGTTKMGRYVF--DHAFLIPGVLVVFLSVA------LGFVVAPLVL-- |
| 4OV8 Chain:A ((6-472)) | DTLNDVIQDPTRRNKLINDNNLLKGIIMG---------------------RDGPVPSSRELIVRPDTLRAIINNRATIETTTMEAEFTETLMES-----NYNSASVKVSAPCITANSEYSESSSFKNTETEKSMYTSSRYLFPQGRIDFTTPDSGDVIKLSPQFTSGVQAALAKATGTEKREALQNLFQEYGCVFRTKVHIGGVLSAHTMETFSRSENETEVKQDVKAGLEGAVKGWGGGATAGHGNTQGTITTSQNRKLNVKYIVNGG------DYTKIQNTEEWVASTNQSEHWRVIEVTEVTAVADLLPQPIRGQVKDLLKPLLGKWVDVEKVPGLESLPVSVYRPKGAIPAGWFWLGDTADASKALLVKPTLPARSGRNPALTS--LHQGSGM-TEQPFVDLPQYQYLSTYFGSFAHDTPP----GSTLRGLRPDHVLPGRYEMHGDTISTAVYVTRPVDVPFPEDEAFDLKSLVRVKLPGSGNPPKPRSALKKSMVLFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -300375 for 3069 contacts (-97.9/contact) +
2D Compatibility (PS) -40755 + (NN) 18365 + (LL) 3576
1D Compatibility (HY) 5200 + (ID) 3900
Total energy: -317889.0 ( -103.58 by residue)
QMean score : 0.012
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