Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIHIGVLSASDRASKGVYEDLSGKAIQEVLSEYLLNPLEFHYEIVADERDLIEKSLIKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSRQSAGIRNKSLIINLPGKPKSIRECLEAVFPAIPYCVDLILGNYMQVNEKNIQAFRPKQ
4TWG Chain:F ((9-157))
-------IIIASTRAAS---TDECGPIIAEWLEQRGFSPLE--SKVVADGNPVGEA--LQDAVEAQVDLIITSGGTGISPTDSTPEQTVAVLDFVIPGLADAIRRAGLPKVPTSVLSRGVCGVAGQTLIVNLPGSPGGVRDGLDVLADVVHHALDQIAGQ----------------
General information:
TITO was launched using:
RESULT:
Template:
4TWG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78440 for 1196 contacts (-65.6/contact) +
2D Compatibility (PS) -15330 + (NN) -927 + (LL) 2460
1D Compatibility (HY) -6800 + (ID) 2700
Total energy: -101737.0 ( -85.06 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_4TWG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TWG-query.scw
PDB file :
Tito_Scwrl_4TWG.pdb
: