Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVRFFGPIKEE-------NFFIKA----NGLKELRAILQ-EKEGLKE--------WLGVCAIALNDHLIDN---LDMPLKDGDVISLLPPVCGG
1WGK Chain:A ((13-108))
CVKVEFGGGAELLFDGVKKHQVALPGQEEPWDIRNLLVWIKKNLLKERPELFIQGDSVRPGILVLINDADWELLGELDYQLQDQDSILFISTLHGG
General information:
TITO was launched using:
RESULT:
Template:
1WGK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51302 for 451 contacts (-113.8/contact) +
2D Compatibility (PS) -8145 + (NN) -1431 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -66828.0 ( -148.18 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_1WGK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WGK-query.scw
PDB file :
Tito_Scwrl_1WGK.pdb
: