Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIAVFGGGAWGRALAFAFGEKN-------E-VKIISRRDLN---EPLKKLN------DALISKGSAPIEQVDLER-GLKAALYVIAISVQHLREWFQ--NASL---PKNAKVLIASKGIEV--LNKAFVSEIAKDFIDPNALCFLAGPSFAAEIIQGLPCALVIHSNNQALALEFANKT-PSFIRAYAQQDIIGGEIAGAYKNVIAIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGG--KTETFLGLSGAGDLFLTANSILSRNYRVGLGLAQN---KPLEVVLEE--LGEVAEGVKTTNAIVEIARKYG--IYTPIASELALLLKGKSV-LESMNDLIRRA |
| 1YJ8 Chain:A ((22-366)) | LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF-ERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVINDADLLIFIVPCQYLESVLASIKE--IKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN-IPCSALSGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLA--GRNAKCSAEFIKSTPKKTWEELENEILKGQKLQGTVTLKYVYHMIKEKNMTNEFPLFTVLHKISFENEDPSSLLKTFMNNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164001 for 2560 contacts (-64.1/contact) +
2D Compatibility (PS) -32647 + (NN) -7211 + (LL) 308
1D Compatibility (HY) -16000 + (ID) 3100
Total energy: -222651.0 ( -86.97 by residue)
QMean score : 0.462
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