Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHILVSGATSGFGLEIAKAFLQKNHVVFGTGRRQENLQKLQLAYPKRFIPLCFDLQNKPETKRAIETIFSMTDRIDALINNAGLALGLNKAYECELDDWEVMIDTNIKGLLHLTRLILPSMIEHDQGTIINLGSIAGTYAYPGGNVYGASKAFVKQFSLNLRADLAGTNIRVSNVEPGLCGETEFSMVRFKGDKIKAQSVYENTLYLKPQDIANIVLWIYEQPSHVNINRIEIMPTSQTFAPLPTHKNP
2EHD Chain:B ((8-227))
---VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALA-AELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSV-------------------------KLKPEDVAQAVLFALEMPGHAMVSEIELRPT-------------
General information:
TITO was launched using:
RESULT:
Template:
2EHD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140058 for 1739 contacts (-80.5/contact) +
2D Compatibility (PS) -22060 + (NN) -4753 + (LL) 2400
1D Compatibility (HY) -10000 + (ID) 3500
Total energy: -177971.0 ( -102.34 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_2EHD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EHD-query.scw
PDB file :
Tito_Scwrl_2EHD.pdb
: