Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLKKSLCALLISGFF---IPPLMKAASFVYDLKFMSFNFNLASPPNNPYWNSLTKMQGRLMPQIGVQLDKRQALMFGAWFIQNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLGIVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWFEGVVDWYGGRNWNNQPKKKNYDFDQFLYFVSSEFQFLKGYLGLGGQLVIFHNANSHSMGDNYPYGGNSYLKPGDATPQWPNGYPYFSQKDNPQGGEIGKYSNPTILDRVYYHAYLKADFKNLMPYMDNIFMTFGTQSSQTHYCVRYASECKN-ARFYNSFGGEFYAQAQYKGFGIFNRYYFSNKPQMH--FYATYGQSLYTGLPWYRAPNFDMIGLYYLYKNKWLSVRADAFFSFVGGGDGYHLYGKGGKWFVMYQQFLTLTIDTRELIDFVKSKIPK-- |
| 4Q3O Chain:A ((31-347)) | EVPIPQSISAEFKAALAQYPTPSVEEARSFV--------------PTTAAQWRDYVQATNKMQKTKIKNMRKHY-----------------------GVTVELLDIKG--VTVRKITPKSLS-----------------PEFKD-------------------HVYIDIHGG-----------------------AYVLFAGLPSIEEGILIAHRLGIVVYSVDYRM--PPAYPFPAALDDVKHVYRVLSQQYDANH---------------IFMGGTSAGGGLLLAFVQGLIENGVATPRAIYAGTPWADLTKTGDSLYTNEGIDRILITYDGTLGASARLYAGNTPLTHPKLSPIYGD--FTDFP----PTFLVTGTRDMFLSDTVRVNRKMRDAGVT-TVLDVYEGLSHADYLVSHQ----TPESQSVYRQLKRFLVGFT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106337 for 2741 contacts (-38.8/contact) +
2D Compatibility (PS) -31606 + (NN) -1072 + (LL) 7028
1D Compatibility (HY) -8000 + (ID) 2750
Total energy: -142737.0 ( -52.07 by residue)
QMean score : ?
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