Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDKRIKTLLLFFGLNMVCLSVSFTNKPHLCFWFLVLGCYLVYEWQKKQKKDFQSAKSLKFDSVSELEKDLNMEVTNDEWDTIKKLNEKLKMFFNVENAIYVFLLVSYLIVGMRVTLSLIDNHGVLK
4YV4 Chain:A ((7-53))
----------------------------------------AAENWRDAMKTELQTIRTEIQEETARRQEELNAQNLVKMQELMSNFF----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4YV4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12173 for 181 contacts (67.3/contact) +
2D Compatibility (PS) -5008 + (NN) -2018 + (LL) 7536
1D Compatibility (HY) 2000 + (ID) 250
Total energy: 14433.0 ( 79.74 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_4YV4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YV4-query.scw
PDB file :
Tito_Scwrl_4YV4.pdb
: