Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSIGSMGKPIEGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLDVPGKETELYAKACKEAKVYGVLSIMERNPDSNENPYNTAIIIDPQGKIILKYRKLFPWNP--------IE--PWYPGDLGMPVCEGPGGSKLAVCICHDGMIPELAREAAYKGCNVYIRISGYSTQV-NDQWILTNRSNAWHNLMYTVSVNLAGYD-NVFYYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENNIYNLGHRGYVAKPGGEHDAGLTYIKDLAAGKYKLPWEDHMKIKDGSIYGYPTTGGRFGK |
| 2W1V Chain:A ((40-300)) | -----------STFRLALIQLQVSS----I-KSDNLTRACSLVREAAK--QGANIVSLPECFNSPYGTTYF--PDYAEKIPGESTQKLSEVAKESSIYLIGGSIPEEDA--GKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDS-FSTFDTP-YCKVGLGICYDMRFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAG-TEETILYSDIDLKKLAEIRQQIPILKQKRADLYTVESK------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175554 for 2254 contacts (-77.9/contact) +
2D Compatibility (PS) -27190 + (NN) -12446 + (LL) 1920
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -224370.0 ( -99.54 by residue)
QMean score : 0.544
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