Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIELLAKFTQIALPNSHPLLKKVLNYAKKHFSQCHMLSSSLLILNDTECFKKNYLLNWVYHALECAHEKDISMHSLEEILQKSHLPIRIKIMAQNTLLEKIEVKVLTFGAEYALFITKHPIAKRFLRQKFSGCVFLETQDELHIRGDSERFWELIVTLNENRIVHNACLDFIYPNGFGKDSYTTMAERKLKECYKALGFIKHENFSEVKKRYLELAKTYHPDLCDLKEKKALYAKRFAIIQEAYSHIKKHA |
| 1HDJ Chain:A ((2-57)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE----PGAEEKFKEIAEAYDVLSDPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24434 for 345 contacts (-70.8/contact) +
2D Compatibility (PS) -5983 + (NN) -3732 + (LL) 16732
1D Compatibility (HY) -400 + (ID) 850
Total energy: -18667.0 ( -54.11 by residue)
QMean score : 0.652
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