Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCAFNLTPPYAVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPV-PCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILIRLFETTTPLIVVLLGKVAQKKIALIPKNKHIIITAPHPSPLS--RGFLGSGVFTSVQKAYREVYRKDFDFSL
4SKN Chain:E ((7-220))-----------SWKKHLSGEFGKPYFIKLMGFVAEERKH-YTVYPPPHQVFTWTQMCDIKDVKVVILGQNPYHGP---NQ-----AHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPRSVYRGFFGCRHFSKTNELLQKSGKKPIDWKE


General information:
TITO was launched using:
RESULT:

Template: 4SKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -122126 for 1701 contacts (-71.8/contact) +
2D Compatibility (PS) -22586 + (NN) -10112 + (LL) 1608
1D Compatibility (HY) -14000 + (ID) 4350
Total energy: -171566.0 ( -100.86 by residue)
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_4SKN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4SKN-query.scw
PDB file : Tito_Scwrl_4SKN.pdb: