Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVVAKKSLGQHFLMDESFLDRIVNALPPLNSLRLIEIGVGLGDLTLKLLDRYP-LKTYEIDSNLCEKMRARLRAEKKPFQLELVEKDALF-LKE------EEPYFLISNLPYYIATRLVLNALKDP-KCRGLLVMTQKEVALKFCAKDSQN---ALSVLAHTIGNATLLFDVPPSAFSPPPKVFSSVFEVIKEPLKEKALASLAQAPFFEEALQKGFETLEDFLKACFSSPRKTLSNNLKKSVSYKEKLDKVLDFLALENQPTSVRASEVK--DYLKLLKSVLKG |
| 1QYR Chain:A ((17-266)) | ---------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPF---LGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMP--------------HPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSV--------EVLTGMGIDPAMRAENISVAQYCQMANYLAEN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119526 for 1867 contacts (-64.0/contact) +
2D Compatibility (PS) -25537 + (NN) -18974 + (LL) 3332
1D Compatibility (HY) -18000 + (ID) 3450
Total energy: -182155.0 ( -97.57 by residue)
QMean score : 0.479
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