Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNTSSSTTLTMNDTIAAIATPLGKGAISIIKISGHNALNILKQLTQKQDFTPRYAYVCDIFSDGVLLDKALVIYFKAPYSFTGEDVCEIQCHGSPLLAQNILQACLNLGARLAKAGEFSKKAFLNHKMDLSEIEASVQLILCEDESVLNALARQLKGELKIFIEEARNNLLKLLASSEVLIDYSEEDIPSDFLKEVSFNLEKQIASFKDLLDFSNAQKQRNKGHALSIVGKPNAGKSSLLNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESADEIERLGIEKSLK-SLENCDIILGVFDLSKPLEKEDFNLMDTLNRTKKPCIVVLNKNDLAPKLELEILKSY---LKIPYSILETNTLNSKACLKDLSQKISEFFPKLDTQNKLLLTSLAQTTALENAITELQNAKSHLDTLELFSYHILSAIENLNLLTRPYETSQMLDSMFSEFCLGK |
| 4KYU Chain:B ((6-163)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAIVGRPNVGKSTIFNRIA-----------------IYSSAEW-NYDFNLIDTGGI-DIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKILYRTKKPVVLAVNKLD-NTEMRANIYDFYSLGFGEPYPISGTHGLG----LGDLLDAVAEHF--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68082 for 1080 contacts (-63.0/contact) +
2D Compatibility (PS) -14877 + (NN) -6626 + (LL) 24540
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -76445.0 ( -70.78 by residue)
QMean score : 0.538
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