Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIGLVKESMDLESRVALVPDDVALIAQKGVEVLVQNSAGANSGYSNEAYESVGAKIVDS-KTAWGQ-DLVVKCKEPLEHEYPLLKEKATLFSYLDLAYQKSLCEMFINKKITSICTETIAGPKNDYPILAPMSVVAGRLAAHLVQHYLLALEHVKGFMGKGVMLGGLSGAQRAKIVVIGGGVVGMESAKVLSQMGAKVTILELDYAKLQ----------NHPYYHLYDLEVLSVNEANIIQALNGAVGLVGAVLVTASQTPKVILRRHLKYMQKQGVVIDVACDLGGCIETIRQTSHSNPVYVEEDLLHYGVPNMPGIVAKTSSTAYSHASVPYLLYYLEHGLKGFLTANTKIVANTLGGLSAYNGYITQEGIAKAFNLAFKSPLEILKEL |
2VHW Chain:C ((1-370)) | MRVGIPTETKNNEFRVAITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLLKVKEPIAAEYGRLRHGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPMSEVAGRLAAQVGAYHLMRTQG-----GRGVLMGGVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEG-AVKRADLV---------IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELADHGWRAACRSNPALAK----GLSTHEGALLSERVATDLGVPFTEPASVLA-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -282759 for 3178 contacts (-89.0/contact) +
2D Compatibility (PS) -38317 + (NN) -10672 + (LL) 1272
1D Compatibility (HY) -25600 + (ID) 6500
Total energy: -362576.0 ( -114.09 by residue)
QMean score : 0.461
|
|
|