Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKATAIAHTNVALIKYWGKRDEHLILPANSSLSFTVDKFYTKTTVEWDEKLTQDTFILNNEQ---KTDAKVARFIDKMREEFGISAKAKITSENHVPTAAGLASSASAFAALALAGSNAAGRKDTKEYISRLARFGSGSASRSVFGDFVIWEKGELADGSDSFAVPFTNKLCDK-MSLVVAVVSDKEKKVSSRDGMRLTVETSPFFENWVSAAEIDLEEMKQAILDEDFIKVGEITERNGMKMHATTLGAEPPFTYFQPQSLEIMDAVRELRENGIPAYFTMDAGPNVKVICERANENIVAEKLSGLAKNVLICHAGKEASVVSDEK
4DU8 Chain:B ((12-309))----ARAHTNIALIKYWGKADETYIIPMNNSLSVTLDRFYTETKVTFDPDFTEDCLILNGNEVNAKEKEKIQNYMNIVRDLAGNRLHARIESENYVPTAAGLASSASAYAALAAACNEALSLNLSDTDLSRLARRGSGSASRSIFGGFAEWEKGH--DDLTSYAHGINSNGWEKDLSMIFVVINN------SRSGMSLTRDTSRFYQYWLDHVDEDLNEAKEAVKNQDFQRLGEVIEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQCRKANLPCYFTMAAGPNVKVLVEKKNKQAVMEQF-----------------------


General information:
TITO was launched using:
RESULT:

Template: 4DU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78199 for 2443 contacts (-32.0/contact) +
2D Compatibility (PS) -31884 + (NN) -11661 + (LL) 2728
1D Compatibility (HY) -22800 + (ID) 7100
Total energy: -148916.0 ( -60.96 by residue)
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_4DU8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DU8-query.scw
PDB file : Tito_Scwrl_4DU8.pdb: