Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNR-YITLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVP-TFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMGG-AGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
| 2OI2 Chain:A ((4-288)) | -----KVGVGQAHSKIILIGEHAVVY-GYPAISLPLLEVEVTCKVVPAE-SPWRLY---------------EEDTLSMAVYASL----EYL---NITEACIRCEID----E----KRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGLDAKTCLSDQPIRFIKNVG------------------------FTELEMDLSAYLVIADTGVYGHTREAIQVVQNKGK----DALPFLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKEIGV------SSLEADSLVETALSHGALGAKMSGGGLGGCIIALVTNLTHAQELAERLEEKGAVQTW---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144690 for 2482 contacts (-58.3/contact) +
2D Compatibility (PS) -30542 + (NN) -15654 + (LL) 5860
1D Compatibility (HY) -4400 + (ID) 3100
Total energy: -192526.0 ( -77.57 by residue)
QMean score : 0.454
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