Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDY--TFVDLETAITTRTKKVPYQEF-WIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDEA----YQL-KVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEV-YKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 2WDC Chain:A ((78-304)) | -----------------------------------------------------RGTPLAYLLSYVDFVELART------FGPIGGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHMV-S-HWEWTLGRERVEEL---LGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYV-KVSHPESFTEGLSFALDERRLQEAVDK-A-RAEGANAVVLLSHNGMQLD-------AALAERI--RG-IDLILSGHTHDLTPRPWRVGKTWIVA----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41618 for 1643 contacts (-25.3/contact) +
2D Compatibility (PS) -23292 + (NN) -8532 + (LL) 8432
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -70060.0 ( -42.64 by residue)
QMean score : 0.269
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